WO2000070016A2 - Genetically modified plants tolerant of stress conditions - Google Patents
Genetically modified plants tolerant of stress conditions Download PDFInfo
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- WO2000070016A2 WO2000070016A2 PCT/IL2000/000281 IL0000281W WO0070016A2 WO 2000070016 A2 WO2000070016 A2 WO 2000070016A2 IL 0000281 W IL0000281 W IL 0000281W WO 0070016 A2 WO0070016 A2 WO 0070016A2
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Definitions
- the present invention relates to genetically modified plants having improved stress tolerance and to nucleic acid constructs useful in the generation of such genetically modified plants.
- the present invention further relates to the use of a modified amino acid and it's derivatives for conferring stress tolerance in wild type plants.
- AK aspartate kinase
- AHS acetyl homoserine sulfhydrylase
- CL cystathionine ⁇ -lyase
- CS cystathionine ⁇ -synthase
- DHPS dihydrodipicolinate synthase
- HAT homoserine acetyltransferase
- HK homoserine kinase
- HSD homoserine dehydrogenase
- MS methionine synthase
- PHS O-phosphohomoserine
- SAM S-adenosyl methionine
- SAMS SAM synthase.
- TDH threonine dehydratase
- TS threonine synthase.
- ROS reactive oxygen species
- Plant cells can be protected against oxidant stress by various radical-scavenging mechanisms, involving antioxidants of low molecular weight, or antioxidant enzymes [Trebst (1991) In Herbicides Resistance in weeds and crops, Caseley, JC. Cussans, GW., Eds Butterworths Oxford, 145].
- Plants use also several other mechanisms to defend against, or to adapt to, different stresses.
- the water deficiency resulting from salt stress has been well studied. Adaptation to water deficiency can involve the accumulation of osmolytes, such as proline [Igarashi et al. (1997) Plant Mol. Biol. 33:857- 865].
- Plants protect themselves against ultra- violet-B light (UV-B - 280-320 nm) by producing phenol flavonoid compounds, which accumulate in the epidermal cells and absorb the UV light. It was found that UV-B causes oxidative stress and that phenolic compounds can be activated by the abso ⁇ tion of UV-B light.
- a plant when a pathogen attack, it responds by inducing several local responses in the cells immediately surrounding the infected site. These include a localized cell death, known as hypersensitive response, characterized by the deposition of callose, physical thickening of cell walls by lignification, as well as the synthesis of various small antibiotic molecules, such as phytoalexins. Genetic factors in both the host and the pathogen determined the specificity of these local responses, which can be very effective in limiting the spread of infection.
- hypersensitive response characterized by the deposition of callose, physical thickening of cell walls by lignification, as well as the synthesis of various small antibiotic molecules, such as phytoalexins.
- the present invention provides polynucleotide constructs and methods utilizing same for conferring improved stress tolerance to plants.
- an isolated polynucleotide comprising: (a) a first nucleic acid sequence encoding an enzyme having homoserine acetyltransferase (HAT) activity or a second nucleic acid sequence encoding an enzyme having acetylhomoserine sulfhydrylase (AHS) activity; and (b) a third nucleic acid sequences capable of enabling the expression of HAT or AHS in plant cells and, optionally, the transportation of the expressed HAT or AHS to the plastids.
- HAT homoserine acetyltransferase
- AHS acetylhomoserine sulfhydrylase
- the isolated polynucleotide comprising both the first and the second nucleic acid sequences.
- the third nucleic acid sequence includes: (i) a plant promoter; and (ii) a plant polyadenylation and termination sequence. According to still further features in the described preferred embodiments the third nucleic acid sequence includes: (i) a plant promoter; (ii) a plant polyadenylation and termination sequence; and (iii) a sequence encoding a plastid transit peptide translationally fused to the 5 '-end of the first or the second nucleic acid sequence for the transportation of the expressed HAT or AHS to the plastids.
- the plant promoter is selected from the group consisting of a constitutive promoter, a tissue specific promoter, an inducible promoter and a chimeric promoter.
- the constitutive plant promoter is selected from the group consisting of CaMV 35S promoter, CaMV19S promoter, FMV34S promoter, sugarcane bacilliform badnavirus promoter, CsVMV promoter, Arabidopsis ACT2/ACT8 actin promoter, Arabidopsis ubiquitin UBQl promoter, barley leaf thionin BTH6 promoter, and rice actin promoter.
- tissue specific plant promoter is selected from the group consisting of bean phaseolin storage protein promoter, DLEC promoter, PHS ⁇ promoter, zein storage protein promoter, conglutin gamma promoter from soybean, AT2S1 gene promoter, ACT 11 actin promoter from Arabidopsis, napA promoter from Brassica napus and potato patatin gene promoter.
- the inducible promoter is selected from the group consisting of a promoter induced in stress conditions comprising light, temperature, drought, high salinity, osmotic shock, oxidant, chemical or pathogenic stress, being selected from the light-inducible promoter derived from the pea rbcS gene, the promoter from the alfalfa rbcS gene, the promoters DRE, MYC and MYB active in drought; the promoters INT, INPS, prxEa, Ha hspl 7.7G4 and RD21 active in high salinity and osmotic stress, the promoters hsr303J and str246C active in pathogenic stress; the rd29A promoter active in dehydration induced by drought, salt loading and by freezing; the stilbene promoter active during UV radiation and high level of ozone, and the promoters hsr303J and str246C active in pathogenic stress.
- a promoter induced in stress conditions comprising light,
- the first or the second nucleic acid sequence is derived from yeast or from bacteria, or is a synthetic gene.
- the first nucleic acid sequence includes a sequence as set forth in SEQ ID NO: 5 or a functional portion thereof.
- the second nucleic acid sequence includes a sequence as set forth in SEQ ID NO:6 or a functional portion thereof. According to still further features in the described preferred embodiments there is provided an expression vector comprising the isolated polynucleotide described above.
- transgenic plant plant derived tissue or a plant cell comprising the isolated polynucleotide described above.
- a genetically modified plant comprising the isolated polynucleotide described above, having an improved tolerance to a stress condition as compared with a corresponding wild-type plant, the stress condition is selected from the group consisting of high salinity stress, drought stress, temperature stress, mineral deficiency stress, osmotic stress, oxidant stress, chemical stress and pathogenic stress.
- a genetically modified plant comprising the met2 gene of Saccharomyces cerevisiae or the metX gene of Leptospira meyer.
- a genetically modified plant having an increased free content, as compared with a corresponding wild-type plant, of arginine and ornithine and/or its related metabolites selected from the group consisting of citrulline, putrescine, nitric oxide, spermine and/or spermidine.
- a genetically modified plant having an increased free content, as compared with a corresponding wild-type plant, of phenols and/or phenols related metabolites.
- a method for producing a genetically modified plant having an increased free content, as compared with a corresponding wild-type plant, of arginine and ornithine and/or its related metabolites comprising the steps of: (a) transforming plant cells with an isolated polynucleotide capable of expressing in plants, an enzyme having homoserine acetyltransferase (HAT) activity or an enzyme having acetylhomoserine sulfhydrylase activity or both; and (b) regenerating transformed plants from the transformed plant cells of (a) and selecting for plants that express HAT.
- HAT homoserine acetyltransferase
- a method for producing a genetically modified plant having an improved tolerance to a stress condition as compared with a corresponding wild-type plant comprising the steps of: (a) transforming plant cells with an isolated polynucleotide capable of expressing in plants, an enzyme having homoserine acetyltransferase (HAT) activity; and (b) regenerating transformed plants from the transformed plant cells of (a) and selecting for plants having an improved tolerance to a stress condition as compared with a corresponding wild-type plant.
- HAT homoserine acetyltransferase
- the enzyme having homoserine acetyltransferase (HAT) activity is selected from the group consisting of yeast met2 and bacterial metX.
- the stress condition is selected from the group consisting of high salinity stress, drought stress, temperature stress, mineral deficiency stress, osmotic stress, oxidant stress, chemical stress and pathogenic stress.
- the step of selecting (step c) is effected by growing the transformed plants under the stress conditions.
- a method of increasing the stress tolerance of a plant comprising the step of applying to the plant homoserine or homoserine derivatives.
- the homoserine or homoserine derivatives are externally applied to the plant. According to still further features in the described preferred embodiments the homoserine or the homoserine derivatives are provided in a liquid solution.
- the liquid solution also includes a surfactant.
- a plant fertilizer comprising a fertilizer base and homoserine or homoserine derivatives, wherein the homoserine or the homoserine derivatives are provided in a concentration sufficient to induce stress tolerance within a plant growing on the plant fertilizer.
- FIG. 1 is a diagram of the aspartate-family biosynthetic pathway in plants. Major regulatory enzymes and their products are indicated. Feedback inhibition (-) and activation (+) loops are shown by dashed-line arrows.
- FIG. 2a is a diagram of the plant (solid lines) and yeast, fungi and bacteria (dashed-line) pathways for methionine biosynthesis.
- FIG. 2b is a diagram of fluxes associated with methionine metabolism in plants.
- FIG. 3 is a diagram of the arginine and proline biosynthesis pathways.
- the intermediates are indicated by their abbreviations: ⁇ -GP, ⁇ -glutamyl phosphate; GSA, ⁇ -glutamyl- 5-semialdehyde; P5C, pyrroline-5- carboxylate; KVA. ⁇ -keto- ⁇ -aminovalerate; P2C. pyrroline-2-carboxylate; AcG, N- acetylglutamate; AcGP, AcG-5-phosphate; AcGSA, AcG-5-semialdehyde; AcORN. N-acetylornithine; CP. carbamoyl- phosphate; CIT. citrulline; ASP, aspartate; AS, arginosuccinate; AGM. agmatine; ⁇ CPUT, N- carbamoylputrescine.
- the thinner arrows indicate the lower possibility in the pathway.
- the enzymes are indicated by numbers within brackets: (1) ⁇ -Glutamyl kinase; (2) GP reductase; (2') P5C synthase; (3) non-enzymatic reaction: GSA — > P5C; (4) P5C reductase; (5) ⁇ -ornithine aminotransferase; (6) P5C reductase; (7) Ornithine ⁇ -aminotransferase; (8) non-enzymatic reaction: KVA ⁇ P2C; (9) P2C reductase; (10) proline dehydrogenase; (1 1) P5C dehydrogenase; (12) AcG synthase; (13) N-acetyltransferase; (14) AcG kinase; (15) AcGSA oxidoreductase; (16) AcOR ⁇ aminotransferase; (17) AcOR ⁇ decarboxylase; (18) ornithine carbamoyltrans
- FIGs. 4a-d are schematic diagrams of nucleic acid constructs (cassettes) used according to the present invention for expression of each of the Saccharomyces cerevisiae met2 and met25 genes encoding HAT and AHS, respectively, or both and targeting of the expressed proteins to the cytosol ( Figures 4a and 4c) and to the plastids ( Figures 4b and 4d) metX gene encoding HAT targeting the expressed protein to the cytosol or to the plastid ( Figures 4a or 4b).
- the chimeric genes are shown in their position between left (LB) and right (RB) borders of the binary vector T-D ⁇ A [pGPTV-HPT- 105 carrying the gene for hygromycin resistance (hpt).
- PRO promoter (CaMV35S ⁇ - constitutive CaMV35S promoter linked to the ⁇ translation enhancer sequence) or the bean phaseolin storage protein promoter for seed-specific expression);
- TER terminator;
- TP transit peptide targeting the enzyme to plastids Pnos, promoter of nopaline synthase gene of Agrobacterium tumefaciens;
- pAg7 gene 7 poly (A) of Agrobacterium tumefaciens.
- FIGs. 5a-f show the coding nucleotide sequences of the Saccharomyces cerevisiae met2, met25 and of the bacterial Leptospira meyeri genes ( Figures
- FIGs. 6-7 are schematic diagrams of nucleic acid constructs (cassettes) for expression of the E. coli lysC gene encoding a mutant aspartate kinase ( Figure 6) and of the 10 Kd zein gene ( Figure 7) in plants.
- FIGs. 8a-b show Northern blot analysis of representative homozygous transgenic tobacco plants expressing the yeast met2 gene ( Figure 8a) and the expressing of the bacterial metX ( Figure 8b) under the control of the CaMV35 S ⁇ promoter.
- FIGs. 9a-b show Western protein dot blots of HAT expressed in transgenic tobacco plants by the yeast met2 gene under control of the CaMV35S ⁇ promoter ( Figure 9a) and under control of the seed-specific bean phaseolin storage protein promoter ( Figure 9b). Proteins extracted from leaves ( Figure 9a) or seeds ( Figure 9b) of the transgenic plants or of wild-type plants (control) were reacted with antibodies specific to HAT. Abbreviations: P. Cont, positive control from the glutathione S-transferase-HAT fusion protein; N. Cont., negative control from extracts from wild-type plants.
- FIGs. lOa-b show Western blots showing chloroplastic and cytosolic (cytoplasmic) compartmentalization of AHS expressed in transgenic tobacco plants by the yeast met25 gene under control of the constitutive CaMV35S ⁇ promoter ( Figure 10a) and under control of the seed-specific bean phaseolin storage protein promoter ( Figure 10b). Proteins extracted from leaves ( Figure 10a) or seeds ( Figure 10b) of the transgenic plants containing the cytoplasmic and chloroplastic-type AHS enzymes or of wild-type plants (control) were reacted with antibodies specific to AHS.
- FIGs. l la-b show Western protein dot blots of the progenies of the crossing between the plants expressing the yeast met2 gene (encoding HAT) and plants expressing the yeast met25 gene (encoding AHS) under control of the constitutive CaMV35S ⁇ promoter, using anti-HAT antibodies (Figure 1 1a) and anti-AHS antibodies ( Figure l ib).
- the crosses are: 1, 2-205 x 17; 3, 4-1 10 x 17; 5. 6-17 x 205; 7, 8-17 x 1 10 (female plants are indicated on the left).
- FIG. 12a-b show the total phenols, of homozygous transgenic plants expressing the met2 gene, and untransformed plants (WT) ( Figure 12a) and transgenic plants expressing the metX gene ( Figure 12b) as measured according to quercitin standard. Bars represent SD of mean, the averages are from five plants.
- FIG. 13 show the chlorophyll levels in transgenic plants and untransformed plants (WT) after 4 h in 10 "5 mM paraquat solution. The Figure allows comparison between the chlorophyll level of disks placed in paraquat and control disks placed in water. Bars represent SD of mean, the averages are from seven plates. FIGs.
- FIG. 14a-b show the effect of TMV infection on leaves of homozygous plants expressing the yeast met2 gene and untransformed plants (WT).
- Figure 14a shows the number of TMV lesions formed on the leaves of plants four days after infection (average from six plants).
- Figure 14b shows representative leaves presenting the TMV lesions from untransformed plants, 17 and 12. The number and lesion diameter can distinguish.
- FIG. 15 show the total phenols in leaves 4 and 5 in transgenic line 17 and untransformed plants (WT) after radiation with UV-B. The samples were removed after 3, 6 and 12 h. Bars represent SD of mean, the averages are from four plants.
- FIG. 16 show the osmotic adjustment of lines 17 and untransformed plants (WT) under drought stress. The control is irrigated plants. Bars represent SD of mean, the averages are from five plants.
- FIG. 17 show the total phenols in cut off leaves after 48 h in various solutions at the greenhouse.
- the present invention is of genetically modified plants having improved stress tolerance and to nucleic acid constructs useful in the generation of such genetically modified plants.
- the present invention is further of the use of a modified amino acid and it's derivatives for conferring stress tolerance in wild type plants. The principles and operation of the present invention may be better understood with reference to the drawings and accompanying descriptions.
- methionine is also the scarcest essential amino acid in, for example, legumes and other crops. Therefore, legume-based animal diets are generally supplemented with chemically-produced free methionine. In 1998 alone, the world consumption of such free methionine as a soy-based feed supplement was 400,000 tons. However, synthetic methionine is considered a low quality food/feed product because its production requires the use of strong organic solvents and residues thereof remain in the final product. There is thus a long felt need for nutritionally balanced crop plants that produce larger amounts of methionine. Various attempts have been made in the past to raise the methionine content in plants by breeding and selection.
- the essential amino acids lysine, threonine and methionine are synthesized from aspartate by a complex pathway that is similar in bacteria and in higher plants.
- the biosynthesis of the aspartate family comprising the amino acids lysine. threonine, methionine and isoleucine is depicted in Figures 1 and 2.
- the carbon skeleton of methionine is derived from aspartate, the sulfur atom from cysteine and the methyl group from N-methyltetrahydrofolate, a triglutamyl derivative (Bryan, 1980). As shown in Figures l-2a-b.
- cystathionine ⁇ -synthase The first enzyme specific for methionine biosynthesis in plants, cystathionine ⁇ -synthase (CS), catalyzes a central step in methionine synthesis by joining metabolites from two separate pathways: PHS (from the aspartate family pathway) and cysteine (from the cysteine biosynthesis pathway), to form cystathionine. that is then converted to homocysteine by the trans-sulfurylase cystathionine ⁇ -lyase (CL).
- PHS from the aspartate family pathway
- cysteine from the cysteine biosynthesis pathway
- an alternative pathway for homocysteine biosynthesis is the direct sulfhydration pathway, in which sulfide substitutes for cysteine as a source of sulfur atom to form homocysteine. but this pathway has been established as of little, if any, physiological significance in the synthesis of methionine in plants (Datko, 1977).
- the final step in methionine biosynthesis in plants is catalyzed by methionine synthase (MS) which converts homocysteine to methionine.
- the aspartate-family biosynthetic pathway involves many enzymes, some of which are common for several or all of the aspartate family amino acids, while others are specific for individual amino acids.
- the rate of synthesis of the amino acids is regulated by a complex process of inhibition of the activity of some key enzymes in the pathway by the relevant amino acid end product(s).
- the major rate-limiting enzyme of the threonine/methionine branch pathway is aspartate kinase (AK), also known as aspartokinase.
- AK controls the production of all the aspartate-family amino acids, and is subject to feedback-inhibition by lysine and/or threonine, and also by the methionine metabolite, S-adenosyl methionine (SAM) which is produced from methionine by SAM synthase (SAMS, Figure 1).
- SAM S-adenosyl methionine
- the methionine biosynthesis pathway and the regulation thereof are interesting not only for the purpose of man intervention directed at elevating the methionine content, but also from an evolutionary point of view. Understanding the methionine biosynthesis pathway has contributed to the development of herbicides that inhibit the methionine biosynthesis enzymes (Azevedo et al.. 1997). New herbicide designers are constantly seeking for biosynthesis pathways which are operative in plants and are absent in animals, so as to develop safer herbicides. The biosynthesis pathway of methionine is a good target since methionine is an essential amino acid for animals.
- Methionine biosynthesis in yeast, fungi and bacteria In yeast, fungi and bacteria the methionine biosynthesis pathway diverges from the aspartate homoserine, one intermediate metabolite upstream to PHS on the threonine biosynthesis pathway of plants. As shown in Figure 2a, dashed lines, homoserine is combined with acetyl coenzyme A to form acetylhomoserine. This reaction is catalyzed by homoserine acetyltransferase (HAT) which is encoded, for example, by the met2 gene of the yeast Saccharomyces cerevisiae. Next, acetylhomoserine is converted into homocysteine.
- HAT homoserine acetyltransferase
- AHS acetylhomoserine sulfhydrylase
- Homocysteine serves as a substrate for the production of both methionine and cysteine, indicating that cysteine is formed through acetylserine sulfhydrylase, as well as through reverse trans- sulftirylation (Cherest, 1993).
- the met2 and met25 genes, as well as other genes in the methionine biosynthesis pathway in Saccharomyces cerevisiae, are regulated by the repression of methionine and SAM (Cherest et al., 1971).
- the methionine synthesis pathway in yeast differs from the main methionine synthesis pathway in plants in two major aspects: (i) the methionine and threonine branches compete for the common intermediate homoserine, rather than for PHS; and (ii) the main pathway for homocysteine biosynthesis in yeast is catalyzed by AHS, using sulfide as a source of sulfur, rather than via the trans-sulfurylation pathway catalyzed by CS and CL, that uses cysteine as a source of sulfur.
- arginine This enzyme is subjected to end product feedback inhibition by arginine. Intracellular localization studies also suggest that most, if not all, of the enzymes of arginine biosynthesis in plants are localized in the plastids. similar to the enzymes associated with other amino acid pathways. Beside its role as a building block of proteins, arginine serves additional functions in plants. Together with its intermediate compound ornithine, arginine serves as donor of the polyamine putrescine, which is further converted into the polyamines spermidine and spermine. These polyamines play important roles in plant development, cellular proliferation and normal cell function and are also involved in the response of plants to salt and osmotic stresses (Chattopadhyay et al., 1997).
- Putrescine levels are known to accumulate in response to various abiotic stresses like K+ deficiency (Smith, 1973), acid stress (Young et al, 1983), oxidant stress (Ye et al, 1997), and osmotic stress (Flores et al., 1982).
- expression of the genes encoding arginine decarboxylase and ornithine decarboxylase, two enzymes which participate in the biosynthesis of putrescine were shown to be stimulated by salt and osmotic stresses (Chattopadhyay et al, 1997).
- the expression level of genes encoding for these enzymes was shown to be positively correlated with salt resistance in various plant species including different rice cultivars (Basu et al, 1991).
- the arginine biosynthesis pathway further provides the precursor ornithine, in particular, for the synthesis of the important amino acid proline, which accumulation has been correlated, in a variety of organisms, to adaptation to osmotic stresses (Delaney and Verma, 1993). Proline accumulation in plants under stress conditions also functions in the processes of energy, amino nitrogen and reducing power storage.
- the conversion of ornithine to proline can occur through two alternative routes, both involving transamination of ornithine, the main route being through pyrroline-5- carboxylate (P5C).
- P5C pyrroline-5- carboxylate
- Application of radioactive ornithine or arginine to organisms results in the formation of radioactively-labeled proline.
- arginine may play a pivotal role in the synthesis of both proline and putrescine, two important metabolites which accumulate during stress and protect the plant.
- the arginine biosynthesis pathway was found to be activated during salinity stress, resulting in arginine accumulation at levels 2-3 fold higher as compared with control plants.
- the ability to elevate arginine during salinity stress was found to be directly correlated to the resistance of different plant species to salinity stress (Lazcano-Ferrat and Lovatt, 1997).
- arginine pathway intermediates ornithine and citrulline (CIT)
- CIT citrulline
- Rabe and Lovatt (1986) suggested that during mineral deficiencies, nitrate and ammonia accumulate and are subsequently removed through de novo arginine biosynthesis.
- Arginine has four nitrogen atoms, thus, de novo arginine biosynthesis provides an efficient mechanism for detoxification of excess tissue ammonia.
- Arginine also serves as a precursor for the biosynthesis of nitric oxide (NO), known to be involved in various processes in mammalian cells and recently shown to be involved in the response of plant cells against pathogen attacks [Durner et al, 1998; Hausladen et al., 1998). It was found, in this respect, that infection of resistant, but not susceptible, tobacco plants with tobacco mosaic virus resulted in enhanced NO synthase activity [Durner et al, 1998).
- NO nitric oxide
- Arginine also serves as an efficient nitrogen storage means in seeds. This is because arginine contains four nitrogen atoms per molecule and the release of nitrogen upon arginine degradation supports the growth of seedlings during germination. A similar degradation of arginine during vegetative senescence supports the release of nitrogen transported into the seeds to support seed development. While reducing the present invention to practice and in an effort to produce plants which overproduce and accumulate methionine, unexpectedly, it was uncovered that the yeast met2 gene and more so, the bacterial metX gene, when expressed in transgenic plants, function in conferring stress tolerance to such plants.
- Plants transformed with these genes both encode for homoserine acetyltransferase (HAT) possess elevated levels of arginine and phenols, compounds which confer such stress tolerance.
- Phenols protect plants against stress in a number of ways, for example, by serving as antioxidants. They are also precursors to lignin (a component of the cell wall), which protects the plant against pathogen invasion. A number of phenols are phytoalexins, which act as antibiotic agents against various pathogens.
- such plants will have the ability to (iii) synthesize higher levels of polyamines which play important roles in plant development, cellular proliferation and normal cell function, as well as in plant response to salt, drought and osmotic stresses and other abiotic stresses like K + deficiency, oxidant stress and osmotic stress; (iv) synthesize higher levels of nitric oxide (NO) which is involved in the response of plant cells against pathogen attacks; (v) produce higher nitrogen storage pools which are required for efficient germination of seedlings and for vegetative senescence; and (vi) produce high levels of proline under osmotic stress and exhibiting higher tolerance to mineral deficiency.
- polyamines which play important roles in plant development, cellular proliferation and normal cell function, as well as in plant response to salt, drought and osmotic stresses and other abiotic stresses like K + deficiency, oxidant stress and osmotic stress
- NO nitric oxide
- a genetically modified plant expressing a recombinant homoserine acetyltransferase (HAT).
- HAT homoserine acetyltransferase
- the nucleic acid sequence encoding the recombinant HAT can be of any non-plant origin, e.g. from yeast fungi or bacteria, or may be a synthetic gene.
- the met2 gene of the yeast Saccharomyces cerevisiae [ENTREZ AJ001940, Ml 5675; Langin et al., 1986]
- the metX gene from the bacterium Leptospira meyeri [ENTREZ Y10744, Bourhy et al, 1997]
- the met2 gene of the filamentous ascomycetes Ascobolus immersus [ENTREZ M26662, Goyon et al, 1989]
- a cDNA from Acremonium chrysogenum [AN E08839, Japanese Patent Application No.
- JP 1995067649-A1 the metA gene of the bacterium Coryne bacterium glutamicum [ENTREZ AF052652] or the gene from operon gerA of Bacillus cereus [ENTREZ AF067645].
- the genetically modified plants of the invention expressing the FIAT encoded by the S. cerevisiae met2 gene or by L. meyeri metX were found to contain an increased free content of arginine and ornithine as compared with corresponding wild-type plants.
- the levels of methionine in these plants as compared to wild type plants remained unchanged although it is expected that these plants also contain an increased free content, as compared with a corresponding wild-type plant, of other arginine related metabolites such as citrulline, putrescine, nitric oxide, spermine and/or spermidine.
- transgenic plants of the present invention failed to provide the results expected, more importantly, and surprisingly the genetically modified plants of the present invention expressing the HAT encoded by the S. cerevisiae met2 gene or by E. meyeri metX gene were found to contain an increased content of total phenols as compared with corresponding wild-type plants. It is expected that these plants also contain an increased free content, as compared with a corresponding wild-type plant, of other phenols related metabolites such as flavanoides (serving as antioxidants), precursors for lignin, and phytoalexins. Further detail of the above results is given in Example 7 of the Examples section which follows.
- the genetically modified plants of the invention expressing the HAT encoded by the S. cerevisiae met2 coding sequence or the L. meyeri metX coding sequence were found to tolerate salt stress, drought, TMV infection, cold, U.V. radiation and oxidant stress conditions and it is expected that they will have an improved tolerance to other stress conditions as compared with corresponding wild-type plants, such as , but not limited to, drought stress, temperature stress, mineral deficiency stress, osmotic stress, oxidant stress, wounding, light stress, chemical stress and other pathogenic stresses.
- homoserine or its derivatives can be utilized to increase the stress tolerance of plants.
- Such an application can be effected by spraying the plant, preferably the canopy thereof, with a solution including homoserine or its derivatives and preferably a surfactant (e.g., Tween20 or the like).
- homoserine or its derivatives can be provided within the irrigation water utilized for watering the plant.
- a fertilizer including a fertilizer base including, for example, plant essential minerals and any other compounds typically included within commercial fertilizers utilized for growing plants can also include homoserine or its derivatives in a concentration sufficient to increase plant tolerance to stress.
- a method of increasing the stress tolerance of a plant which method includes the application of homoserine or homoserine derivatives to plants or plant seedlings.
- a genetically modified plant expressing a recombinant acetylhomoserine sulfhydrylase (AHS).
- AHS acetylhomoserine sulfhydrylase
- the nucleic acid sequence encoding the recombinant AHS can be of any origin e.g., from yeast fungi or bacteria, or may be a synthetic gene.
- the met25 gene of the yeast Saccharomyces cerevisiae [ENTREZ X04493, Sangsoda et al., 1985; Kerjan et al., 1986], met25 gene of Schizosaccharomyces pombe [Brzywczy and Paszewski, 1994], cDNA of the fungi Acremonium chrysogenum [ENTREZ E12441and U19394, Japanese Patent Application No.
- transgenic plants co-expressing both the HAT and AHS coding sequences also contained wild type levels of methionine.
- transgenic plants of the present invention failed to produce the expected results with respect to methionine production and/or accumulation, such plants can serve as a basis for further genetic manipulation in efforts to generate methionine rich plants.
- All of the above genes have been cloned, sequenced and their protein products have been characterized. Based on sequence homology these genes can be used to isolate additional or alternative genes encoding for HAT or for AHS from other species using cloning method and strategies well known in the art.
- sequences described in the above references and/or which are identified by their ENTREZ accession numbers are incorporated by reference as if fully set forth herein.
- the genetically modified plant of the present invention expressing both recombinant HAT and AHS can be transformed with a recombinant mutant AK which is less sensitive to feedback inhibition by lysine and/or threonine than the wild-type plant AK.
- the nucleic acid sequence encoding such recombinant AK may be of any origin, e.g. bacterial, or may be a synthetic gene.
- this mutant AK is of bacterial origin and is expressed by the E. coli lysC gene.
- transgenic tobacco plants [Shaul et al, 1992; Karchi et al., 1993; Galili, 1995; EP 0485970, which are incorporated by reference as if fully set forth herein].
- the transgenic plants expressing the genes encoding HAT, AHS and preferably the recombinant mutant AK can also be utilized for further genetic manipulation utilizing gene knock-out or knock- in techniques. Standard methods known in the art can be used for implementing knock-in/knock-out procedure. Such methods are set forth in, for example, United States Patent Nos.
- such plants can be further transformed with one or more additional methionine biosynthesis gene(s) in order to further increase methionine content.
- additional methionine biosynthesis gene(s) in order to further increase methionine content.
- Such transformation can be employed by standard methodology which is further detailed hereinunder.
- the genetically modified plant of the present invention containing both recombinant HAT and AHS, and possibly a recombinant mutant AK which is less sensitive to feedback inhibition by lysine and/or threonine than the wild-type plant AK. can be transformed with a nucleic acid sequence encoding a recombinant methionine-rich protein.
- methionine-rich protein refers to a protein characterized in that at least 5 %, preferably up to 35% of its amino acids are methionine residues.
- An example of a methionine-rich protein is the 10 Kd zein protein from maize [described by Kirihara et al., 1988; accession number AC X07535]. Numerous ways can be employed according to the present invention to provide a gene encoding a methionine-rich protein. One option is to use a cloned gene which is derived from a natural source and which encodes a methionine-rich protein. A number of methionine-rich plant seed storage proteins have been identified and their corresponding genes have been isolated.
- Examples include, but are not limited to: (i) a corn-derived gene encoding a 15 kDa zein protein which contains about 15 % methionine by weight [Pederson et al., 1986]; (ii) a corn-derived encoding a 10 kDa zein protein which contains about 30 % methionine by weight [Kirihara et al., 1988]; (iii) a Brazil nut-derived gene encoding a seed 2S albumin which contains 24 % methionine by weight [Altenbach et al., 1987]; (iv) a sunflower seed-derived gene encoding a methionine-rich 2S protein [Kortt et al..
- the accumulation of the methionine-rich protein in the tobacco seeds resulted in an up to 30 % increase in the level of methionine in the seeds [Altenbach et al., 1989].
- This methionine-rich storage protein has also been efficiently expressed in canola seeds [Altenbach et al., 1992] and in lupins [Molvig et al., 1997].
- high levels of the seed-specific 15 kDa methionine-rich zein were obtained under the control of the regulatory sequences from a bean phaseolin storage protein gene in transformed tobacco plants.
- the signal sequence of the monocot precursor was correctly processed in these transformed plants [Hoffman et al., 1987; Bagga et al., 1995].
- the sequences described in the above references or references therein are inco ⁇ orated herein by reference.
- the isolated polynucleotide can be introduced into plants using any conventional method of transformation or by viral infection.
- One such transformation method is the leaf-disk approach [Hosch et ⁇ /.,1985] which, as further exemplified in the Examples section that follows, has been successfully employed to implement other aspects of the present invention.
- a genetically modified plant co-expresses (i) a mutaaspartate kinase (AK) which is less sensitive to feedback inhibition by lysine and/or threonine than the corresponding wild-type plant; (ii) a recombinant homoserine acetyltransferase (HAT); (iii) a recombinant acetylhomoserine sulfhydrylase (AHS); and (iv) a recombinant methionine-rich protein.
- AK mutaaspartate kinase
- HAT and AHS and additional endogenous plant enzymes provide for an alternative pathway for the synthesis of methionine which is insensitive to end product inhibition or competition for carbon skeleton with the threonine pathway.
- the recombinant methionine-rich protein provides for an in-plant trap for free methionine, assisting in preventing further metabolism of this amino acid and in maintenance of physiologically acceptable levels thereof as a free amino acid.
- the genetically modified plants of the invention may be heterozygotes, hemozygotes or homozygotes.
- homozygote transgenic plants co-expressing any subset or all of the above recombinant proteins is readily available by, for example, crossing heterozygotes or homozygotes (selfed) plants independently expressing these proteins.
- a TO heterozygote plant expressing HAT is selfed one or several times to generate progenies which are homozygotes.
- a TO heterozygote plant expressing AHS is selfed one or several times to generate progenies which are homozygotes.
- a TO heterozygote plant expressing aspartate kinase which is not subject to end product inhibition is selfed one or several times to generate progenies which are homozygotes.
- a TO heterozygote plant expressing a recombinant methionine-rich protein is selfed one or several times to generate progenies which are homozygotes. Homozygote progenies are then crossed to obtain heterozygotes co-expressing any pair of proteins. These heterozygotes are then selfed to obtain homozygotes expressing that pair of proteins. Homozygotes expressing that pair of proteins are then crossed with homozygotes expressing one or more of the additional proteins, to thereby obtain heterozygotes which are selfed to obtain homozygotes co-expressing any subset or all of the above listed proteins. It will be appreciated that crossing of heterozygotes followed by appropriate selection of heterozygote progenies can be similarly implemented.
- Progenies identification and selection can. for example, be effected by PCR amplification of the introduced heterologous sequences (nucleic acid coding sequences, promoters), and/or by resistance to antibiotics, e.g.. hygromycin.
- An alternative approach consists in serially transgenizing a plant and its transgenic progenies by genes encoding the above proteins. Still alternatively, a nucleic acid construct harboring sequences encoding for all or any subset of the above recombinant proteins can be employed in a single transgenization process to provide a genetically modified plant expressing or co-expressing any subset or all of the above proteins.
- a genetically modified plant according to the present invention would contain at least 10 %, preferably at least 2 fold, more preferably at least 5 fold, more preferably at least 10 fold or more, total methionine as compared with a corresponding wild-type plant.
- Such a genetically modified plant further or alternatively contains at least 10 %, preferably at least 2 fold, more preferably at least 5 fold, more preferably at least 10 fold, more preferably at least 20-40 fold, most preferably at least 40- 100 fold, optimally above 100 fold, more free arginine as compared with a corresponding wild-type plant.
- each of the isolated polynucleotides employed according to the present invention in plants is carried out under the control of a suitable plant promoter.
- Promoters which are known or found to cause transcription of selected gene or genes in plant cells can be used according to the invention.
- the particular promoter selected should be capable of causing sufficient expression to result in the production of an effective amount of a desired protein.
- Such promoters may be obtained from plants, plant pathogenic bacteria or plant viruses.
- the promoter can be a constitutive promoter which is active in all or most plant tissues, a tissue-specific promoter which is active mostly in specific tissue or tissues, an inducible promoter which is induced under stress conditions, and a chimeric promoter.
- tissue specific promoter refers also to a developmental stage specific promoter.
- constitutive promoters There is a plurality of constitutive promoters known to express in plant tissues.
- constitutive promoters that can be used according to the invention include, but are not necessarily limited to, the 35S and 19S promoters of cauliflower mosaic virus (CaMV35S and CaMV19S) [Guilley et al., 1982]; the full-length transcript promoter from the figwort mosaic virus (FMV34S) [U.S. Pat. No.
- CsVMV cassava vein mosaic virus
- Arabidopsis ACT2/ACT8 actin promoter Arabidopsis ubiquitin UBQl promoter
- rice actin promoter Arabidopsis ubiquitin UBQl promoter
- barley leaf thionin BTH6 promoter promoters obtained from T-DNA genes of Agrobacterium tumefaciens such as nopaline and mannopine synthases.
- tissue-specific promoters such as fruit or seed specific promoters.
- tissue specific promoters known to express in plant tissues.
- Tissue specific promoters may be used according to the present invention to direct methionine ove ⁇ roduction in tissues consumed as food or feed, such as seeds in cereals and tubers in potatoes.
- seed-specific promoters include, but are not limited to.
- Examples of other fruit or seed specific promoters include the E8, E4, E17 and J49 promoters from tomato [Lincoln and Fischer 1988], as well as the 2A11 promoter described in U.S. Pat. No. 4.943,674.
- a promoter derived from the potato patatin gene may be used.
- Stress inducible promoters can also be employed in the present invention including, but not limited to, the light inducible promoter derived from the pea rbcS gene [Coruzzi et al, 1984]; the promoter from the alfalfa rbcS gene [Khoudi et al, 1997]; [McElroy et al, 1990]; promoters active in drought, such as DRE promoter or MYC, MYB promoters [Liu et al, 1998; Abe et al, 1997]; a promoter active in high salinity, such INT, INPS or prxEa [Nelson et al, 1998; Wanapu et al, 1996]; a promoter active under osmotic shock, such as Ha hsp 17.7G4 or RD21 promoters [Coca et al, 1996; Koizumi et al, 1993]; a promoter active in dehydration such drought, salt and freezing such
- a promoter activated by UV radiation and high level of ozone such as the stilbene promoter [Schubert, 1997]
- a promoter active in cases of pathogenicity such as hsr303J or str246C [Pontier et al, 1998; Perez et al, 1997].
- the constitutive, tissue-specific and inducible promoters used for expressing the recombinant proteins of this invention may be further modified, if desired, to alter expression characteristics, thus generating chimeric promoters.
- the CaMV35S promoter may be ligated to a portion of the ssRUBISCO gene which represses the expression of ssRUBISCO in the absence of light, to create a chimeric promoter which is active in leaves but not in roots.
- the terms "CaMV35S" are used herein, the terms "CaMV35S".
- FMV35S or to this effect any other promoter include genetic variations of these promoters, e.g., chimeric promoters derived by means of ligation with operator regio, random or controlled mutage, addition or duplication of enhancer sequences, e.
- a short nucleic acid sequence for 5 ' mRNA non-translated sequence may be added which enhances translation of the mRNA transcribed from the chimeric gene.
- An example is the omega sequence derived from the coat protein gene of the tobacco mosaic virus [Galilee et al, 1987].
- the recombinant proteins are preferably modified to include a transit peptide for plastid targeting.
- Nucleic acids encoding transit peptides are well known in the art since the genes encoding for all of the proteins which are destined to operate in the plant plastids include such sequences.
- a preferred transit peptide to translocate foreign expressed proteins into the chloroplasts is derived from the pea rbcS-3A gene [Fluhr et al, 1986]. Plastid targeting is of particular importance for the mutant AK and the HAT proteins which are directly involved in the synthesis pathway(s).
- the protein AHS and the methionine-rich protein may be directed to any compartment, either the plastid or the cytoplasm.
- the polynucleotide constructs described hereinabove can be utilized to directly transform plastid DNA, see for example, Toriyama, K. et al. (1988) Bio/Technology 6: 1072-1074.
- the methodology exemplified herein below in the Examples section for tobacco can be readily used to genetically modify other crop plants.
- One ordinarily skilled in the art would know how to implement the methodologies described therein in plant species other than tobacco.
- the genetically modified plant according to the present invention is preferably a crop.
- crop refers to any plant cultivar grown in a commercialized form. Such plants are typically grown in cultivated fields. Plants which form good candidates for the genetic manipulation according to the present invention are those known to be relatively poor in methionine. Such plants include, but are not limited to, mainly legumes, e.g. soybean, clover, alfalfa, pea, mung bean and Vicia narbonensis: cereals (both seeds and vegetative tissues), e.g. wheat, barley, rice, oats, maize, sorghum and forage grasses; Solanaceae, e.g. potato, tomato; canola and sunflower. These plants are especially suitable for genetic manipulation as described herein because they are shown in the prior art to be amenable for transformation processes and/or viral infection.
- legumes e.g. soybean, clover, alfalfa, pea, mung bean and Vicia narbonensis
- cereals both seeds and vegetative tissues
- a gene In order to be introduced into and expressed in a plant, a gene must be engineered for plant transformation and expression. To introduce such a gene into a plant and to express it therein, a suitable chimeric gene and expression vector must be constructed.
- a typical chimeric gene for transformation into a plant will preferably include a promoter region, a heterologous nucleic acid coding sequence and a 3' non-translated polyadenylation site.
- a "heterologous coding sequence” means a structural coding sequence that is typically not native to the plant being transformed, with respect to the promoter means that the coding sequence does not exist in nature in the same gene with the promoter to which it is now attached.
- Codon gene means a novel non- naturally occurring gene which is comprised of parts of different genes.
- various nucleic acid fragments may be manipulated as necessary to create the desired vector. This includes using linkers or adapters as necessary to form suitable restriction sites or to eliminate unwanted restriction sites or other like manipulations which are known to those of ordinary skill in the art.
- the promoters applicable for use with the present invention are described herein above.
- the 3' non-translated region contains a polyadenylation signal which functions in plants to cause the addition of polyadenylated nucleotides to the 3' end of a mRNA sequence.
- suitable 3' regions are the 3' transcribed, non-translated regions containing the polyadenylation signal of the tumor- inducing (Ti) plasmid genes of Agrobacterium, such as the nopaline synthase (NOS) gene, and plant genes like the 7s soybean storage protein genes and the pea E9 small subunit of the RuBP carboxylase gene (ssRUBISCO).
- Ti tumor- inducing
- NOS nopaline synthase
- ssRUBISCO pea E9 small subunit of the RuBP carboxylase gene
- the RNA produced by the constructs of the present invention also preferably contains a 5' non-translated leader sequence.
- This sequence can be derived from the promoter selected to express the gene or genes, and can be specifically modified so as to increase translation of the mRNAs.
- the 5' non- translated regions can also be obtained from viral genes, from suitable eukaryotic genes, or from a synthetic gene sequence.
- the present invention is not limited to constructs wherein the non-translated region is derived from the 5' non-translated sequence that accompanies the promoter sequence of choice.
- the non-translated leader sequences can be part of the 5' end of the non-translated region of the native coding sequence for the heterologous coding sequence, or part of the promoter sequence, or can be derived from an unrelated promoter or coding sequence as discussed above.
- the vector that is used to introduce heterologous nucleic acid sequences into the plant will comprise an appropriate selectable marker.
- the vector is a plant expression vector comprising both a selectable marker and an origin of replication.
- the vector will be a shuttle vector, which can propagate both in E.
- the construct comprises an appropriate selectable marker and origin of replication
- the construct comprises the promoter of choice
- the gene of interest is placed in a viral vector which is used to infect the cells. This virus may be integrated in the genome of the plant species of choice or may remain non-integrated.
- nucleic acid sequences encoding the functional proteins is an essential element of the invention, it is modular and can be used in different contexts.
- the promoter of choice that is used in conjunction with this invention will comprise any suitable promoter as further detailed herein above. It will be appreciated by one skilled in the art, however, that it is necessary to make sure that the transcription start site(s) will be located upstream of open reading frame.
- the promoter that is selected will comprise an element that is active in the particular host plant cells of interest.
- These elements may be selected from transcriptional regulators that activate the transcription of genes essential for the survival of these cells in conditions of stress or starvation, including the heat shock proteins. Promoters containing this type of sequence may advantageously be used according to the present invention.
- nucleic acid sequences encoding the translational start site (ATG) of the gene to be expressed will be placed downstream of the transcription start site(s).
- Any equivalent functional element selected from similar elements in one or another organism may be used as appropriate in the plant species of choice.
- Equivalent functional elements will include elements with synthetic bases, or elements found in other genes of plants as well as elements found in genes of other unicellular or multicellular organisms.
- the coding sequence of the gram negative bacteria Leptospira meyeri metX gene was kindly provided by Prof. Isable Saint Girons (Institute Pasteur, France) as an insert into the pbl2 plasmid.
- the MetX coding sequence (ENTREZ accession number Y10744) which was first described by Bourhy et al. ( 1997), is shown in Figure 5f (SEQ ID NO:9), while the amino acid sequence thereof is shown in Figure 5e (SEQ ID NO: 10).
- the substrates and co-factors for HAT are present in plant plastids.
- Two nucleic acid constructs were constructed for the expression of the yeast met2 gene in plants. Both constructs contained a DNA segment encoding a plastid transit peptide for targeting the yeast HAT enzyme to plant plastids: one was designed to express the yeast HAT enzyme in the vegetative tissues of plants ( Figure 4b, YEAST GENE - met2; PRO - CaMSV35S ⁇ ) and the other in the plant seeds ( Figure 4b, PRO - bean phaseolin storage protein promoter).
- Figure 4a can be made with the yeast met2 gene.
- Two nucleic acid constructs were constructed for the expression of the bacterial metX gene in plants.
- the first construct is similar to above met2 construct, except that the structural gene coding sequence ( Figure 4b) includes a DNA segment which targets the bacterial enzyme to plastids.
- the second nucleic acid construct lacked the DNA segment encoding the plastid transit peptide which targets the enzyme to the cytoplasm ( Figure 4a).
- Figure 4a Preparation of nucleic acid constructs including the yeast met!
- a polymerase chain reaction (PCR) fragment corresponds to the met2 coding sequence was amplified from the pM2-l plasmid using the following oligonucleotide primers: PI : 5'-GGCAATGCTGCATACTTTAA AATCGAAAACG-3' (SEQ ID NO:l), which introduced an Sphl restriction site containing the ATG translation- initiation codon of met2; and P2: 5'- TCAGCTTAAACTCCAATAGGAAGGC-3' (SEQ ID NO:2), which is complementary to the 3' end of the gene and contains the stop codon thereof.
- PCR conditions were 30 cycles of: 1 minute of denaturation at 95 °C; 1.5 minutes of annealing at 61°C; and 1.5 minutes of elongation driven by Expend DNA polymerase (Boehringer), performed at 72 °C.
- the resulting PCR product was ligated to a PCR- vector, pGMT (Promega). After digestion with Sphl and Pstl, the PCR fragment was subcloned to the CE and CEPH vectors [Shaul et al, 1992; Karchi et al, 1993] which were previously digested with the same enzymes.
- CEmet2 The CE vector containing the coding sequence of S. cerevisiae met2 (herein “CEmet2”) was designed according to Figure 4b to express the gene in vegetative tissues and to target the HAT protein to the plant plastids. It contains the constitutive promoter (PRO) CaMV35S ⁇ . A DNA sequence coding for the transit peptide (TP) derived from the pea rbcS-3A gene was inserted between the ⁇ DNA and the met2 coding sequence.
- TP transit peptide
- CEPHmet2 The CEPH vector containing the coding sequence of S. cerevisiae met2 (herein “CEPHmet2”) was designed according to Figure 4b to express the gene in seeds and to target the HAT protein to the plant plastids. It contains the bean phaseolin storage protein promoter (PRO). The other sequences are as for the
- the DNA inserts were sequenced from both strands to ensure that no mutation had been introduced during the course of PCR amplification.
- CEmet2 and CEPHmet2 vectors were digested with the restriction endonucleases Smal and Sacl and the inserts harboring the met2 gene and the other sequences described hereinabove were subcloned into the binary Ti plasmid, pGPTV-HPT-105, carrying the gene for hygromycin resistance [Becker et al, 1992). As further detailed hereinunder, these constructs were used to transform tobacco plants by the leaf disc transformation method.
- CDmet2 and CDPHmet2 vectors are designed according to Figure 4a without the DNA sequence coding for the transit peptide.
- Nucleic acid constructs including the yeast met25 gene Four constructs including the yeast S. cerevisiae met25 gene were prepared.
- a polymerase chain reaction (PCR) fragment corresponding to the met25 coding sequence was amplified from the pEMBLYr25 plasmid using the following ohgonucleotide primers: P3 : 5'-GGCATGCCATCTCATTT CGATACTG-3' (SEQ ID NO:3), which introduced an Sphl restriction site containing the ATG translation-initiation codon of met25 and P4: 5'- TCATGGTTTTTGGCCAGCGAAAACAG-3' (SEQ ID NO:4), which is complementary to the 3' end of the gene and contains the stop codon thereof.
- PCR conditions were 30 cycles of: 1 minute of denaturation at 95 °C; 1.5 minutes of annealing at 61°C; and 1.5 minutes of elongation driven by the Expend DNA polymerase (Boehringer) at 72 °C.
- the resulting PCR product was ligated to the PCR- vector, pGMT (Promega). After digestion with Sphl and Pstl, the PCR fragment was subcloned to the CE and CEPH vectors as described above and to the CD and CDPH vectors.
- lc Preparation of nucleic acid constructs including the bacterial metX gene: Two constructs each including the bacterial L. meyeri metX gene were prepared.
- CEmetX One construct was designed for targeting the resulting protein AHT to the plastids, herein designated CEmetX, was similar to the CEmet2 construct described above, except for the structural gene which was metX in this case, whereas the other construct was designed similarly to that shown in Figure 4a and results in targeting AHS to the cytosol (designated CDmetX).
- PCR polymerase chain reaction
- CGTAG -3' (SEQ ID NO: 12), which is complementary to the 3' end of the gene, and which includes the 6 x Histidine epitope tag (in frame), a stop codon and a Pstl restriction site.
- PCR conditions were 30 cycles of: 1 minute of denaturation at 95 °C; 1.5 minutes of annealing at 58°C; and 1.5 minutes of elongation effected by the Expend DNA polymerase (Boehringer) and performed at 72 °C.
- the resulting PCR product was ligated to a PCR- vector, pGMT (Promega). After digestion with Sphl and Pstl, the PCR fragment was subcloned into the CE and CD vectors.
- the CDmetX vector is designed according to Figure 4a without the DNA sequence coding for the transit peptide.
- Yeast strains, media, growth condition and complementation assays The following Saccharomyces cerevisiae strains were used while reducing the present invention to practice: CC360-16D (MATa, his7, ura3, met2) and CC365-1A (MATa, his3, ura3, met25) [described in Surdin-Kerjan et al, 1989; Forlan et al, 1991] were kindly provided by Prof. Yolander Surdin-Kerjan (Gif-sur-Yvette, France); the strain X4004-3A (MATa, lys5, t ⁇ l, ura3, met2) was kindly provided by Prof. Martegani (Milan, Italy).
- the respective pGMT plasmids were digested by the restriction endonucleases Ncol and Sail and the sticky ends of the inserts thereof were blunted by a Klenow enzyme (Boehringer).
- Each of the inserts was then independently subcloned into the yeast expression vector pFL61 [Minet et al 1992], which was previously digested with the restriction endonuclease Not and was blunted by Klenow. Met2 and met25 sense and antisense vectors were identified and isolated.
- yeast strains CC360-16D, X4004-3A and CC365-1A were then transformed in yeast strains CC360-16D, X4004-3A and CC365-1A, as appropriate, and the transformed mutants were grown at 30 °C, under agitation, in 0.67 % Yeast Nitrogen Base (YNB, Difco) supplemented with 2 % glucose and the appropriate amino acids, without methionine.
- Yeast transformation was performed following a standard protocol [Vanoni. et al, 1983].
- nucleic acid constructs were constructed for the expression of the E. coli lysC gene.
- Two constructs contained the DNA sequence coding for the transit peptide (from pea rbcS-3 A gene) for targeting of the expressed AK to the plastids ( Figure 6), and two constructs lacked the DNA sequence coding for the transit peptide, thus targeting the expressed AK to the cytosol.
- the promoter was CaMV35S or a tissue-specific promoter, for vegetative or tissue-specific expression of the mutant AK, respectively.
- Nucleic acid constructs including the maize gene coding for the 10 kDa zein The coding sequence of the maize gene coding for the methionine- rich 10 kDa zein [described by Kirihara et al. 1988; accession number AC X07535] was kindly provided by Dr. Suman Bagga (New Mexico State University, USA). Nucleic acid constructs including this gene are constructed under the constitutive promoter CaMV35S or under the inducible rbcS promoter of alfalfa, which expresses the protein in high level in vegetative tissues (Figure 7).
- PCR is carried out with primers having the Smal and Xbal restriction sites and the resulting PCR product is ligated to PCR vector pGMT (Promega). After the digestion with Xbal and Smal, the PCR fragment is subcloned to the pPZPl 11 plasmid [Hajdukiewicz et ⁇ /.,1994], containing the 5 CaMV35S promoter or the rbcS promoter at the 5' end and the epitope tag 3HA at the 3' end. useful for further detection of the protein in the tissues by using suitable antibodies.
- Transgenic plants were selected based on their ability to regenerate and root on media containing 15 mg/ml hygromycin. The plants were further grown on Nitsch medium in magenta boxes in a growth room at 25 °C, light intensity of 30 to 40 mE • ⁇ r 2 • sec *1 , and 16/8 hours of day /night lengths. Leaves from about 1 -month-old plants 0 grown in magenta were tested for the presence of the yeast met2 and met25 genes or the bacterial metX gene by PCR using the primers and PCR conditions described herein above.
- Tl progenies were tested for 5 the segregation of the hygromycin-resistance gene that was included in the yeast or bacterial gene constructs. In all cases, approximately three-quarters of the Tl progenies were hygromycin-resistant, indicating that each of the transgenes, independently, was integrated at a single locus of the tobacco genome. Seeds from the Tl selfed transgenic plants were germinated and grown on Nitsch medium containing hygromycin and were then grown to maturity in the greenhouse, after which seeds were collected therefrom.
- O-acetylhomoserine was synthesized following the protocol of Nagai et al. [1971]. Its biological activity was tested by the ability of the yeast strain CC360-16D (met2-) to grow in minimal medium supplemented with the synthesized O- acetylhomoserine.
- transgenic plants TO transgenic plants expressing the yeast met2 or met25 gene, either constitutively or in a seed-specific manner, and the transgenic plants expressing the metX gene were analyzed by PCR for the presence of the yeast sequences using met2, met25 or metX specific primers. All thirty transgenic plants for each of the chimeric constructs which were selected for hygromycin resistance were found to carry the respective yeast HAT or AHS gene. Six plants of each group that expressed the highest level of their respective gene or enzyme were self-pollinated (selfed), and Tl plants were divided to heterozygous and homozygous plants, on the basis of germination of their selfed T2 seeds on medium with hygromycin.
- T2 control plants While all of the T2 control plants were sensitive to hygromycin, all of the T2 seeds of the homozygous progenies were hygromycin-resistant. Most of the T2 seeds of heterozygous plants segregated as 0.75 resistant and 0.25 sensitive to hygromycin. The segregation frequency of the Tl plants also indicated that the T-DNA behaved as a single Mendelian locus in these plants.
- Leaf No. 5 was removed from homozygous transgenic plants and from untransformed plants grown for ten weeks in the greenhouse. Fifteen disks (2 cm in diameter) were excized from each leaf. Five disks were transferred to plates containing DDW with 0.05% triton X, and ten disks were transferred to two plates containing 10 "5 mM paraquat (Zeneca, Fernhrst, Surrey, UK) with triton X (five disks per plate). Following one hour in the dark, the plates were exposed to sunlight for 4 hours. The disks were wiped dry and placed in tubes containing 80% acetone. After grinding the leaves in a homogenizer, the tubes were shaken overnight at 4°C.
- TMV tobacco mosaic virus
- the plants were infected with a suspension of the common strain of TMV (0.5 mg/ml) in a solution containing carborundum, by gently rubbing 50 ⁇ l of the virus suspension on to the adaxial surface of the leaf. Control plants were treated in identical fashion with DDW and carborundum. After four days of growing in the green house, the number and the size of the lesions were measured. 3j. Testing transgenic plants expressing the met2 gene for an increase in total phenols as a result of exposure to UV-B light: In order to test the ability of the transgenic plants (line 17) and untransformed plants to accumulate phenols during exposure to UV-B light, ten-week plants were transferred from the greenhouse to a dark room. A UV-B fluorescent light source (302 nm) was placed 1.5 m from the plants. Samples from leaves 4 and 5 were taken prior to exposure and again after exposures of 3, 6, and 12 h. Total phenols and antioxidant activity were measured.
- Transgenic line 17 and untransformed plants were grown for eight weeks in the greenhouse. Irrigation of half the plants was stopped in order to generate drought stress in these plants. Leaves and plants were removed on the first the day of the experiment, following eight days, and at morning wilting (i.e. when the upper leaves were already hanging loosely in the morning). The level of proline (amino acids that accumulate during osmotic stress) was measured in these leaves according to protocol [Bates et al, 1973]. Osmotic adjustment was examined by placing leaves in DDW for 4 h in a cold room, freezing them in liquid nitrogen and measuring total solubles by psycrometer. A low level of osmotic potential indicates a high level of osmolites in the cell.
- FIG. 8a shows the results of several representative transgenic plants showing high and very low expressions. No band appears in untransformed plants tested, while a band corresponding in size to the met2 mRNA (1650 bases) appears at different intensities in the various transgenic plants tested.
- Western dot-blot analysis using antibodies raised against yeast HAT, was performed in order to examine the level of the HAT protein in leaves ( Figure 9a). The HAT protein was present in the transgenic plants and, as expected, there was a positive correlation between the protein and mRNA levels (compare Figures 8a and 9a).
- CaMV35S ⁇ promoter apparently had a normal phenotype.
- O-acetylhomoserine the level of free amino acid was determined in extracts of leaves of the transgenic plants. Unexpectedly, it was found that these plants ove ⁇ roduced arginine and ornithine: in some plants the level of arginine reached 64 mol % of the total free amino acids (see Table 1, below). However, no O-acetylhomoserine could be detected. It is possible that this metabolite is further catabolized in the plant cells.
- Tobacco plants were also transformed with a construct harboring the yeast met2 coding sequence under the regulation of the seed-specific promoter of bean phaseolin, that is active both in the embryo and, to a smaller extent, in the endosperm of tobacco seeds.
- the expression of the met2 gene was assayed in protein dot blots derived from mature seeds of 30 individually transformed heterozygous TO plants, as well as from three control untransformed plants. Protein extracts from several of the transgenic seeds showed a positive spot reactive with anti-HAT serum. The level of met2 protein in mature seeds was generally lower than in the vegetative tissues (compare Figures 9a and 9b). Free amino acids were examined from four of the transgenic seeds and one of these plants, No. 325, contained 51 mol % arginine and 0.5 mol % ornithine. EXAMPLE 5
- the four constructs including the met 25 gene, namely, CEmet25, CEPHmet25. CDmet25 and CDPHmet25. were subcloned into the binary vector pGPTV-HPT-105 of Agrobacterium tumefaciens and were introduced into Nicotiana tabaccum by the leaf-disc protocol.
- Tobacco plants producing both yeast AHS and yeast HAT were obtained by crossing transgenic plants producing each of these enzymes individually. Seeds from crossed pods were germinated and grown on media containing hygromycin. Approximately 25 % of the seedlings derived from each cross exhibited PCR positive results for both genes, and were referred to as the progenies of the cross. Three transgenic genotypes were used: plant 17, which produced a high level of the yeast HAT in the plastids; plant 110. which produced a high level of AHS in the cytosol. and plant 205. which produced a high level of AHS in the plastids. Two crosses were performed: 17 x 1 10 and 17 x 205. Eight plants were examined by protein dot-blot analysis with antibodies against yeast AHS ( Figure 1 1a) and against yeast HAT ( Figure l ib), showing that the progenies co-produced both AHS and HAT.
- Transgenic plants expressing the bacterial metX gene The expression of the met2 gene in vegetative tissues of TO heterozygous plants was tested by Northern blot analysis by using the yeast metX gene as a probe.
- Figure 8b illustrates the results of several representative transgenic plants. Reactive bands were not detected in the untransformed plants tested while a band corresponding in size to the metX mRNA was detected at different intensities in the various transgenic plants. These plants accumulate arginine up to 15% of their total free amino acids and displayed phenol levels approximately 1.5-fold higher than that of W.T. plants ( Figure 12b).
- Transgenic plants expressing the yeast met2 gene - resistance to paraquat Disks leaves from representative homozygous transgenic plants expressing the met2 gene and from untransformed plants were exposed to paraquat. The results demonstrate a correlation between the level of met2 expression in transgenic plants and the effect of paraquat. Transgenic lines 11 and 12 that express the met2 at high level are more resistant to paraquat than the untransformed plants ( Figure 13). The leaf disks acquired from transformed lines 1 1 and 12 remained green while those acquired from the untransformed plants whitened as the results of paraquat effect.
- Transgenic plants expressing the yeast met2 gene - resistance to tobacco mosaic virus (TMV) The results show ( Figures 14a-b) that the number and diameter (1.5-2.5 mm) of the TMV lesions in transgenic line 12 which expresses the met2 at high levels is significantly lower than in untransformed plants (wild-type). In transgenic line 17 which expresses the met2 gene at moderate levels, lesion density and diameter (2.5-3.5 mm) was less than that observed in untransformed plants, but higher than that observed in line 12.
- UV-B - 280-320 nm Ultra-violet-B light
- Plants protect themselves by producing flavonoid compounds, which accumulate in the epidermal cells and absorb the UV light. It was found that UV-B causes oxidative stress and that phenolic compounds can be activated by the abso ⁇ tion of UV-B light.
- Transgenic line 17 accumulated twice as much phenol as the control, while the W.T. plants accumulated 1.3 times of the control ( Figure 15).
- Transgenic plants expressing the yeast met2 gene- tolerance to drought stress Transgenic line 17 and wild-type plants were grown for eight weeks in the greenhouse. Irrigation of half the plants was stopped in order to cause drought stress in these plants. Leaves and plants were removed on the first the day of the experiment ( Figure 16a), after eight days ( Figure 16b), and at morning wilting (i.e. when the upper leaves were already hanging loosely in the morning) ( Figure 16c).
- the wild-type plants exhibited morning wilting on day 12 while transgenic line 17 exhibited morning wilting on day 14. This two day difference is statistically significant since during these days the biomass accumulation (calculated as % Dry weight /Fresh Weight) of the plants were 7.7 ⁇ 0.8 for the wild-type and 9.8 ⁇ 1.1 for line 17, showing that line 17 can accumulate more biomass during stress.
- Transgenic plants expressing the yeast met2 gene- tolerance to salt stress Transgenic line 12 and wild-type plants were grown for five weeks in vermiculite and then transferred to hydroponics containers containing a growth medium. Following a week of adjustment, salt was gradually added over two days, to final concentrations of 75 and 150 mM NaCl. The control consisted of plants grown without the addition of salt. After two weeks line 12 showed more tolerance to salinity stress than wild-type plants: their leaves were greener and they showed less decay. The results of this preliminary experiment are summarized in the Table 2 below.
- Transgenic plants expressing the yeast met2 gene- tolerance to cold stress Five, 35 day old plants from each transgenic line tested and from untransformed plants were transferred to a cold room at -1°C. After ten days the plants were returned to the greenhouse for recovery. Table 3 below shows the ability of these plants to survive. The results show that line 12 is more tolerant to cold than the wild-type plants.
- EXAMPLE 8 Homoserine derivatives increase the level of total phenols in untransformed plants
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WO2007051626A2 (en) | 2005-11-01 | 2007-05-10 | Universiteit Utrecht Holding B.V. | Disease resistant plants |
US9226515B2 (en) | 2004-02-03 | 2016-01-05 | Cargill, Incorporated | Protein concentrate and an aqueous stream containing water-soluble carbohydrates |
US9932600B2 (en) | 2007-02-01 | 2018-04-03 | Enza Zaden Beheer B.V. | Disease resistant tomato plants |
US10501754B2 (en) | 2007-02-01 | 2019-12-10 | Enza Zaden Beheer B.V. | Disease resistant potato plants |
US10597675B2 (en) | 2013-07-22 | 2020-03-24 | Scienza Biotechnologies 5 B.V. | Downy mildew resistance providing genes in sunflower |
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EP0485970A2 (en) * | 1990-11-13 | 1992-05-20 | Yeda Research And Development Company Limited | Transgenic plants overproducing threonine and lysine |
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